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Ubuntu で、次のソフトウエアをインストールするためのスクリプトを示します。 Ubuntuの端末を使って、コマンドでインストールします．
目次
サイト内の関連 Web ページ:
Ubuntu のシステム更新などを終わっておくこと
端末を開き、次を実行
sudo apt update sudo apt -yV upgrade sudo apt -yV dist-upgrade sudo apt -yV autoremove sudo apt autoclean sudo shutdown -r now
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| filezilla | firefox |
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| Emacs |
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| Blender | MeshLab | MakeHuman | Inkscape | GIMP | pinta |
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| QGIS |
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| Openshot |
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| SQLite3 | sqliteman |
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| Python 3.6 | Python 2.7 | R システム | Java JDK 8 | eclipse | scratch |
sudo apt -yV install build-essential gcc g++ dpkg-dev pkg-config python3-dev python3-pip python3-numpy python-dev python-pip python-numpy sudo apt -yV install git make cmake cmake-curses-gui autoconf automake flex bison clang binutils swig curl sudo apt -yV install subversion ccache sudo apt -yV install zip unzip sudo apt -yV install libopenblas-dev liblapack-dev nvidia-cuda-dev sudo apt -yV install nvidia-cuda-toolkit sudo apt -yV install libxi-dev libsndfile1-dev libopenexr-dev libjpeg-dev libalut-dev libsdl-dev libavdevice-dev libavformat-dev libavutil-dev libavcodec-dev libswscale-dev libx264-dev libxvidcore-dev libmp3lame-dev libspnav-dev libglu1-mesa-dev libv4l-dev sudo apt -yV install libbz2-dev libsqlite3-dev libssl-dev libreadline-dev libpng-dev libjpeg-dev libtiff-dev zlib1g-dev libx11-dev libgl1-mesa-dev libxrandr-dev libxxf86dga-dev libxcursor-dev libfreetype6-dev libvorbis-dev libeigen3-dev libopenal-dev libode-dev libbullet-dev libgtk2.0-dev sudo apt -yV install libgtk-3-dev libatlas-base-dev gfortran sudo apt -yV install nvidia-cg-toolkit
「anaconda3-5.2.0」、「2.7.15」のところは、「pyenv versions」の結果を見て、適切に設定すること(最新版をおすすめ)
sudo apt -yV install libbz2-dev libsqlite3-dev libssl-dev libreadline-dev libpng-dev libjpeg-dev zlib1g-dev libx11-dev libfreetype6-dev cd /tmp wget https://repo.anaconda.com/archive/Anaconda3-5.2.0-Linux-x86_64.sh bash Anaconda3-5.2.0-Linux-x86_64.sh source ~/.bashrc
「anaconda3-5.2.0」のところは、実際にインストールした版を設定すること
conda install -y conda-build
「anaconda3-5.2.0」のところは、実際にインストールした版を設定すること
cd /tmp sudo rm -f get-pip.py wget https://bootstrap.pypa.io/get-pip.py python get-pip.py
「anaconda3-5.2.0」のところは、実際にインストールした版を設定すること
conda update -y setuptools conda update -y conda conda update -y conda-build
conda install -y gcc_linux-64 conda install -y gxx_linux-64 conda update -y --all
「anaconda3-5.2.0」のところは、実際にインストールした版を設定すること
conda install -y numpy conda install -y six conda install -y protobuf conda install -y pillow conda install -y hdf5 conda install -y h5py conda install -y chainer # conda install -y scikit-learn conda install -y scikit-image conda install -y matplotlib conda install -y seaborn conda install -y graphviz conda install -y pydot conda install -y yaml conda install -y flask conda install -y django conda install -y sympy conda install -y pandas conda install -y sqlite conda install -y redis conda install -y scipy conda install -y gensim conda install -y cython conda install -y opencv conda install -y pylint conda install -y bz2file conda install -y PyOpenGL conda install -y ipykernel # pip install ... か github を使うもの # 最初の conda ... は、下の pip でいれているものの前提ソフトウエア conda install -y termcolor astor wheel setuptools six protobuf werkzeug markdown absl-py grpcio gast future six click cligj click-plugins munch fiona python-dateutil pytz pyproj shapely pip install git+https://github.com/msgpack/msgpack-python pip install git+https://github.com/davisking/dlib pip install git+https://github.com/ageitgey/face_recognition pip install git+https://github.com/jrosebr1/imutils pip install --ignore-installed --upgrade tensorflow pip install git+https://github.com/keras-team/keras pip install --ignore-installed --upgrade pyglet pip install --ignore-installed --upgrade pygame pip install --ignore-installed --upgrade cocos2d pip install --ignore-installed --upgrade geopandas pip install git+https://github.com/DinoTools/python-overpy # conda-forge か pip install git+https://github... でインストールするもの pip install git+https://github.com/python-visualization/folium conda install -y -c conda-forge exifread conda install -y -c conda-forge haversine conda install -y -c conda-forge utm # conda install -y -c conda-forge gdal #again conda install -y conda conda update -y --all
「2.7.15」のところは、実際にインストールした版を設定すること
conda create --name py27 python=2.7 cd /tmp sudo rm -f get-pip.py wget https://bootstrap.pypa.io/get-pip.py python get-pip.py exit
ubuntu 16.04 用
sudo apt -yV install python3-django sudo apt -yV install python3-exif sudo apt -yV install python3-flask sudo apt -yV install python3-gdal sudo apt -yV install python3-geopandas sudo apt -yV install python3-pygraphviz sudo apt -yV install python3-h5py sudo apt -yV install python3-matplotlib sudo apt -yV install python3-numpy sudo apt -yV install python3-pandas sudo apt -yV install python3-pydot sudo apt -yV install python3-redis sudo apt -yV install python3-skimage sudo apt -yV install python3-sklearn sudo apt -yV install python3-scipy sudo apt -yV install python3-seaborn sudo apt -yV install python3-six sudo apt -yV install python3-sympy sudo apt -yV install python3-yaml
sudo add-apt-repository ppa:webupd8team/java sudo apt -yV install oracle-java8-installer sudo apt -yV install oracle-java8-set-default java -version
cd /tmp
sudo apt -yV install libjpeg62
sudo apt -yV install r-base
#
echo 'options(repos="http://cran.rstudio.com"); update.packages(checkBuilt=TRUE, ask=FALSE)' | sudo R --vanilla
sudo rm /tmp/a.$$.r
echo 'source("http://bioconductor.org/biocLite.R")' > /tmp/a.$$.r
echo 'biocLite("EBImage") ' >> /tmp/a.$$.r
cat /tmp/a.$$.r | sudo R --vanilla
echo 'install.packages("dplyr", repos="http://cran.rstudio.com/", clean=TRUE, INSTALL_opts=c("--no-docs", "--no-html"))' | sudo R --vanilla
echo 'install.packages("plyr", repos="http://cran.rstudio.com/", clean=TRUE, INSTALL_opts=c("--no-docs", "--no-html"))' | sudo R --vanilla
echo 'install.packages("dplyr", repos="http://cran.rstudio.com/", clean=TRUE, INSTALL_opts=c("--no-docs", "--no-html"))' | sudo R --vanilla
echo 'install.packages("reshape2", repos="http://cran.rstudio.com/", clean=TRUE, INSTALL_opts=c("--no-docs", "--no-html"))' | sudo R --vanilla
echo 'install.packages("ggplot2", repos="http://cran.rstudio.com/", clean=TRUE, INSTALL_opts=c("--no-docs", "--no-html"))' | sudo R --vanilla
echo 'install.packages("knitr", repos="http://cran.rstudio.com/", clean=TRUE, INSTALL_opts=c("--no-docs", "--no-html"))' | sudo R --vanilla
echo 'install.packages("sp", repos="http://cran.rstudio.com/", clean=TRUE, INSTALL_opts=c("--no-docs", "--no-html"))' | sudo R --vanilla
echo 'install.packages("raster", repos="http://cran.rstudio.com/", clean=TRUE, INSTALL_opts=c("--no-docs", "--no-html"))' | sudo R --vanilla
sudo apt -yV install gdal-bin
echo 'install.packages("rgdal", repos="http://cran.rstudio.com/", clean=TRUE, INSTALL_opts=c("--no-docs", "--no-html"))' | sudo R --vanilla
#
sudo apt -yV install r-recommended
sudo apt -yV install rstudio
sudo apt -yV install libopenjfx-java cd /tmp wget http://www.bluej.org/download/files/BlueJ-linux-412.deb sudo dpkg -i BlueJ-linux-412.deb cd /tmp wget http://www.greenfoot.org/download/files/Greenfoot-linux-310.deb sudo dpkg -i Greenfoot-linux-310.deb
sudo apt -yV install eclipse pleiades
Ubuntu では scratch
sudo apt -yV install scratch
sudo apt -yV install octave octave-*
sudo apt -yV install nodejs sudo apt -yV install npm sudo npm install -g n sudo apt -yV install android-sdk
Git, git-hub (GitHub), CMake, cmake-gui, ImageMagick (画像), FFMpeg (ビデオデータ処理), p7zip (圧縮, 展開), Graphviz (グラフデータ構造可視化), net-tools, hwinfo (ハードウエア情報), gdal(地理情報), tesseract, jq (JSON整形), jsonlint (JSONチェッカ)
sudo apt -yV install git sudo apt -yV install git-hub sudo apt -yV install cmake sudo apt -yV install cmake-curses-gui sudo apt -yV install cmake-gui sudo apt -yV install imagemagick sudo apt -yV install ffmpeg sudo apt -yV install p7zip-full sudo apt -yV install graphviz graphviz-dev sudo apt -yV install net-tools sudo apt -yV install hwinfo sudo apt -yV install gdal-bin libgdal-dev sudo apt -yV install tesseract-ocr tesseract-ocr-jpn tesseract-ocr-script-jpan libtesseract-dev libleptonica-dev tesseract-ocr-jpn sudo apt -yV install jq sudo apt -yV install jsonlint
xpdf (PDF リーダ), shutter (画面キャプチャ), catfish (ファイル検索)
sudo apt -yV install xpdf sudo apt -yV install shutter sudo add-apt-repository -y -n ppa:sicklylife/ppa sudo apt update sudo apt -yV install libgoo-canvas-perl sudo apt -yV install catfish
FileZilla (ファイル転送), firefox (Webブラウザ), Wireshark (ネットワーク), netcat (通信), AWS Command Line Interface (AWS), RealVNCViewer (リモート接続)
sudo apt -yV install filezilla sudo apt -yV install firefox sudo apt -yV install wireshark sudo apt -yV install netcat sudo apt -yV install awscli aws-shell # RealVNCViewer cd /tmp sudo apt -yV install libice6 libsm6 wget https://www.realvnc.com/download/file/viewer.files/VNC-Viewer-6.17.1113-Linux-x64.deb sudo dpkg -i VNC-Viewer-6.17.1113-Linux-x64.deb
Visual Studio Code, Emacs, leafpad, gedit, Nodepad++
# Visual Studio Code # see https://code.visualstudio.com/docs/setup/linux cd /tmp curl https://packages.microsoft.com/keys/microsoft.asc | gpg --dearmor > microsoft.gpg sudo mv microsoft.gpg /etc/apt/trusted.gpg.d/microsoft.gpg sudo sh -c 'echo "deb [arch=amd64] https://packages.microsoft.com/repos/vscode stable main" > /etc/apt/sources.list.d/vscode.list' sudo apt update sudo apt -yV install code # emacs sudo apt -yV install emacs # leafpad sudo apt -yV install leafpad # gedit sudo apt -yV install gedit gedit-plugins gedit-developer-plugins # Notepad++ sudo snap install nodepad3
Blender (3次元), POV-ray, MeshLab, MakeHuman, Inkscape, GIMP, pinta, CloudCompare
sudo apt -yV install blender sudo apt -yV install povray povray-examples sudo apt -yV install meshlab sudo apt -yV install makehuman sudo apt -yV install inkscape sudo apt -yV install gimp sudo apt -yV install pinta # CloudCompare sudo apt -yV install qtbase5-dev qtdeclarative5-dev qt5-default qttools5-dev libqt5widgets5 libqwt-qt5-dev libqt5svg5-dev cd /tmp wget https://github.com/CloudCompare/CloudCompare/archive/master.zip unzip master.zip rm -f master.zip cd CloudCompare-master rm -rf build mkdir build cd build cmake .. cmake --build . sudo make install # Blender VR cd /tmp sudo rm -f blender-2.74-a8adeeb-linux-glibc211-x86_64.tar.bz2 wget ftp://blendervrdownloads:[email protected]/compiled/blender-2.74-a8adeeb-linux-glibc211-x86_64.tar.bz2 cd /usr/local sudo rm -rf /usr/local/blender-2.74-a8adeeb-linux-glibc211-x86_64 sudo tar -xpvjof /tmp/blender-2.74-a8adeeb-linux-glibc211-x86_64.tar.bz2 sudo chown -R $USER /usr/local/blender-2.74-a8adeeb-linux-glibc211-x86_64 sudo rm -f /usr/bin/blendervr sudo ln -s /usr/local/blender-2.74-a8adeeb-linux-glibc211-x86_64/blender /usr/bin/blendervr
QGIS
sudo apt -yV install qgis
VLC media player (メディア), Openshot
sudo apt -yV install vlc sudo apt -yV install openshot
SQLite3, DB Browser for SQLite (sqlitebrowser), sqliteman, Redis 64bit
sudo apt -yV install sqlite3 sudo apt -yV install sqlitebrowser sudo apt -yV install redis-server redis-tools # sqliteman sudo apt -yV install libqscintilla2-dev cd /tmp wget https://sourceforge.net/projects/sqliteman/files/sqliteman/1.2.2/sqliteman-1.2.2.tar.bz2 tar -xvjof sqliteman-1.2.2.tar.bz2 cd sqliteman-1.2.2 rm -rf build mkdir build cd build cmake .. cmake --build . sudo make install
OpenCV(コンピュータビジョン), CUDA 9.1 (cuda-9-1), OpenALPR, OpenNI, libPCL, Guava, Dlib
#
sudo apt -yV install nvidia-cuda-dev nvidia-cuda-doc nvidia-cuda-gdb
sudo apt -yV install nvidia-cuda-toolkit
sudo apt -yV install openalpr openalpr-utils libopenalpr-dev
sudo apt -yV install openni2-utils libopenni2-dev primesense-nite-nonfree
sudo apt -yV install libpcl-dev
sudo apt -yV install libguava-java
#
cd /tmp
rm -rf opencv
rm -rf opencv_contrib
git clone https://github.com/opencv/opencv.git
git clone https://github.com/opencv/opencv_contrib.git
sudo apt install python-dev python3-dev
cd opencv
mkdir build
cd build
cmake -D CMAKE_BUILD_TYPE=RELEASE \
-D CMAKE_INSTALL_PREFIX=/usr/local \
-D INSTALL_PYTHON_EXAMPLES=ON \
-D OPENCV_EXTRA_MODULES_PATH=/tmp/opencv_contrib/modules \
-D BUILD_opencv_python2=OFF \
-D BUILD_opencv_python3=ON \
-D PYTHON_DEFAULT_EXECUTABLE=python3 \
-D BUILD_EXAMPLES=ON ..
make -j4
sudo make install
sudo /sbin/ldconfig
# sudo apt -yV install libcv-dev
# DLib
cd /tmp
wget http://dlib.net/files/dlib-19.15.zip
unzip dlib-19.15.zip
cd dlib-19.15
rm -rf build
mkdir build
cd build
cmake .. -DUSE_AVX_INSTRUCTIONS=YES ..
cmake --build .
sudo make install
cd /tmp/dlib-19.15
python setup.py install
freecad
sudo apt -yV install freecad
# panda3d pip install --user --pre --user --extra-index-url https://archive.panda3d.org/ panda3d
cd /tmp
sudo apt -yV install libxml2-dev libfftw3-dev libfreetype6-dev
echo 'options(repos="http://cran.rstudio.com"); update.packages(checkBuilt=TRUE, ask=FALSE)' | sudo R --vanilla
echo 'options(repos="http://cran.rstudio.com") ' > /tmp/a.$$.r
cat /tmp/a.$$.r | sudo R --vanilla
# EBImage
sudo rm /tmp/a.$$.r
echo 'source("http://bioconductor.org/biocLite.R")' > /tmp/a.$$.r
echo 'biocLite("EBImage") ' >> /tmp/a.$$.r
cat /tmp/a.$$.r | sudo R --vanilla
# dplyr
echo 'options(repos="http://cran.rstudio.com") ' > /tmp/a.$$.r
echo 'install.packages("dplyr", repos="http://cran.rstudio.com/", clean=TRUE, INSTALL_opts=c("--no-docs", "--no-html")) ' >> /tmp/a.$$.r
cat /tmp/a.$$.r | sudo R --vanilla
# qvalue
sudo rm /tmp/a.$$.r
echo 'source("http://bioconductor.org/biocLite.R")' > /tmp/a.$$.r
echo 'biocLite("qvalue") ' >> /tmp/a.$$.r
cat /tmp/a.$$.r | sudo R --vanilla
# pam
echo 'options(repos="http://cran.rstudio.com") ' > /tmp/a.$$.r
echo 'install.packages("pam", repos="http://cran.rstudio.com/", clean=TRUE, INSTALL_opts=c("--no-docs", "--no-html")) ' >> /tmp/a.$$.r
cat /tmp/a.$$.r | sudo R --vanilla
# pca3d
echo 'options(repos="http://cran.rstudio.com") ' > /tmp/a.$$.r
echo 'install.packages("pca3d", repos="http://cran.rstudio.com/", clean=TRUE, INSTALL_opts=c("--no-docs", "--no-html")) ' >> /tmp/a.$$.r
cat /tmp/a.$$.r | sudo R --vanilla
# tm
echo 'options(repos="http://cran.rstudio.com") ' > /tmp/a.$$.r
echo 'install.packages("tm", repos="http://cran.rstudio.com/", clean=TRUE, INSTALL_opts=c("--no-docs", "--no-html")) ' >> /tmp/a.$$.r
cat /tmp/a.$$.r | sudo R --vanilla
# mmand
echo 'options(repos="http://cran.rstudio.com") ' > /tmp/a.$$.r
echo 'install.packages("mmand", repos="http://cran.rstudio.com/", clean=TRUE, INSTALL_opts=c("--no-docs", "--no-html")) ' >> /tmp/a.$$.r
cat /tmp/a.$$.r | sudo R --vanilla
# devtools
echo 'options(repos="http://cran.rstudio.com") ' > /tmp/a.$$.r
echo 'install.packages("devtools", repos="http://cran.rstudio.com/", clean=TRUE, INSTALL_opts=c("--no-docs", "--no-html")) ' >> /tmp/a.$$.r
cat /tmp/a.$$.r | sudo R --vanilla
# ctv
echo 'options(repos="http://cran.rstudio.com") ' > /tmp/a.$$.r
echo 'install.packages("ctv", repos="http://cran.rstudio.com/", clean=TRUE, INSTALL_opts=c("--no-docs", "--no-html")) ' >> /tmp/a.$$.r
cat /tmp/a.$$.r | sudo R --vanilla
# osmar
echo 'options(repos="http://cran.rstudio.com") ' > /tmp/a.$$.r
echo 'install.packages("osmar", repos="http://cran.rstudio.com/", clean=TRUE, INSTALL_opts=c("--no-docs", "--no-html")) ' >> /tmp/a.$$.r
cat /tmp/a.$$.r | sudo R --vanilla
# pi0
echo 'options(repos="http://cran.rstudio.com") ' > /tmp/a.$$.r
echo 'install.packages("pi0", repos="http://cran.rstudio.com/", clean=TRUE, INSTALL_opts=c("--no-docs", "--no-html")) ' >> /tmp/a.$$.r
cat /tmp/a.$$.r | sudo R --vanilla
# leaps
echo 'options(repos="http://cran.rstudio.com") ' > /tmp/a.$$.r
echo 'install.packages("leaps", repos="http://cran.rstudio.com/", clean=TRUE, INSTALL_opts=c("--no-docs", "--no-html")) ' >> /tmp/a.$$.r
cat /tmp/a.$$.r | sudo R --vanilla
# ifs
echo 'options(repos="http://cran.rstudio.com") ' > /tmp/a.$$.r
echo 'install.packages("ifa", repos="http://cran.rstudio.com/", clean=TRUE, INSTALL_opts=c("--no-docs", "--no-html")) ' >> /tmp/a.$$.r
cat /tmp/a.$$.r | sudo R --vanilla
# BMA
echo 'options(repos="http://cran.rstudio.com") ' > /tmp/a.$$.r
echo 'install.packages("BMA", repos="http://cran.rstudio.com/", clean=TRUE, INSTALL_opts=c("--no-docs", "--no-html")) ' >> /tmp/a.$$.r
cat /tmp/a.$$.r | sudo R --vanilla
# WriteXLS
echo 'options(repos="http://cran.rstudio.com") ' > /tmp/a.$$.r
echo 'install.packages("WriteXLS", repos="http://cran.rstudio.com/", clean=TRUE, INSTALL_opts=c("--no-docs", "--no-html")) ' >> /tmp/a.$$.r
cat /tmp/a.$$.r | sudo R --vanilla
# CHsharp
echo 'options(repos="http://cran.rstudio.com") ' > /tmp/a.$$.r
echo 'install.packages("CHsharp", repos="http://cran.rstudio.com/", clean=TRUE, INSTALL_opts=c("--no-docs", "--no-html")) ' >> /tmp/a.$$.r
cat /tmp/a.$$.r | sudo R --vanilla
# brew
echo 'options(repos="http://cran.rstudio.com") ' > /tmp/a.$$.r
echo 'install.packages("brew", repos="http://cran.rstudio.com/", clean=TRUE, INSTALL_opts=c("--no-docs", "--no-html")) ' >> /tmp/a.$$.r
cat /tmp/a.$$.r | sudo R --vanilla
# data.table
echo 'options(repos="http://cran.rstudio.com") ' > /tmp/a.$$.r
echo 'install.packages("data.table", repos="http://cran.rstudio.com/", clean=TRUE, INSTALL_opts=c("--no-docs", "--no-html")) ' >> /tmp/a.$$.r
cat /tmp/a.$$.r | sudo R --vanilla
# pcaPP
echo 'options(repos="http://cran.rstudio.com") ' > /tmp/a.$$.r
echo 'install.packages("pcaPP", repos="http://cran.rstudio.com/", clean=TRUE, INSTALL_opts=c("--no-docs", "--no-html")) ' >> /tmp/a.$$.r
cat /tmp/a.$$.r | sudo R --vanilla
# fastICA
echo 'options(repos="http://cran.rstudio.com") ' > /tmp/a.$$.r
echo 'install.packages("fastICA", repos="http://cran.rstudio.com/", clean=TRUE, INSTALL_opts=c("--no-docs", "--no-html")) ' >> /tmp/a.$$.r
cat /tmp/a.$$.r | sudo R --vanilla
# zoo
echo 'options(repos="http://cran.rstudio.com") ' > /tmp/a.$$.r
echo 'install.packages("zoo", repos="http://cran.rstudio.com/", clean=TRUE, INSTALL_opts=c("--no-docs", "--no-html")) ' >> /tmp/a.$$.r
cat /tmp/a.$$.r | sudo R --vanilla
# base
echo 'options(repos="http://cran.rstudio.com") ' > /tmp/a.$$.r
echo 'install.packages("abind", repos="http://cran.rstudio.com/", clean=TRUE, INSTALL_opts=c("--no-docs", "--no-html")) ' >> /tmp/a.$$.r
cat /tmp/a.$$.r | sudo R --vanilla
echo 'options(repos="http://cran.rstudio.com") ' > /tmp/a.$$.r
echo 'install.packages("boot", repos="http://cran.rstudio.com/", clean=TRUE, INSTALL_opts=c("--no-docs", "--no-html")) ' >> /tmp/a.$$.r
cat /tmp/a.$$.r | sudo R --vanilla
echo 'options(repos="http://cran.rstudio.com") ' > /tmp/a.$$.r
echo 'install.packages("car", repos="http://cran.rstudio.com/", clean=TRUE, INSTALL_opts=c("--no-docs", "--no-html")) ' >> /tmp/a.$$.r
cat /tmp/a.$$.r | sudo R --vanilla
echo 'options(repos="http://cran.rstudio.com") ' > /tmp/a.$$.r
echo 'install.packages("chron", repos="http://cran.rstudio.com/", clean=TRUE, INSTALL_opts=c("--no-docs", "--no-html")) ' >> /tmp/a.$$.r
cat /tmp/a.$$.r | sudo R --vanilla
echo 'options(repos="http://cran.rstudio.com") ' > /tmp/a.$$.r
echo 'install.packages("cluster", repos="http://cran.rstudio.com/", clean=TRUE, INSTALL_opts=c("--no-docs", "--no-html")) ' >> /tmp/a.$$.r
cat /tmp/a.$$.r | sudo R --vanilla
echo 'options(repos="http://cran.rstudio.com") ' > /tmp/a.$$.r
echo 'install.packages("codetools", repos="http://cran.rstudio.com/", clean=TRUE, INSTALL_opts=c("--no-docs", "--no-html")) ' >> /tmp/a.$$.r
cat /tmp/a.$$.r | sudo R --vanilla
echo 'options(repos="http://cran.rstudio.com") ' > /tmp/a.$$.r
echo 'install.packages("colorspace", repos="http://cran.rstudio.com/", clean=TRUE, INSTALL_opts=c("--no-docs", "--no-html")) ' >> /tmp/a.$$.r
cat /tmp/a.$$.r | sudo R --vanilla
echo 'options(repos="http://cran.rstudio.com") ' > /tmp/a.$$.r
echo 'install.packages("effects", repos="http://cran.rstudio.com/", clean=TRUE, INSTALL_opts=c("--no-docs", "--no-html")) ' >> /tmp/a.$$.r
cat /tmp/a.$$.r | sudo R --vanilla
echo 'options(repos="http://cran.rstudio.com") ' > /tmp/a.$$.r
echo 'install.packages("foreign", repos="http://cran.rstudio.com/", clean=TRUE, INSTALL_opts=c("--no-docs", "--no-html")) ' >> /tmp/a.$$.r
cat /tmp/a.$$.r | sudo R --vanilla
echo 'options(repos="http://cran.rstudio.com") ' > /tmp/a.$$.r
echo 'install.packages("lattice", repos="http://cran.rstudio.com/", clean=TRUE, INSTALL_opts=c("--no-docs", "--no-html")) ' >> /tmp/a.$$.r
cat /tmp/a.$$.r | sudo R --vanilla
echo 'options(repos="http://cran.rstudio.com") ' > /tmp/a.$$.r
echo 'install.packages("lmtest", repos="http://cran.rstudio.com/", clean=TRUE, INSTALL_opts=c("--no-docs", "--no-html")) ' >> /tmp/a.$$.r
cat /tmp/a.$$.r | sudo R --vanilla
echo 'options(repos="http://cran.rstudio.com") ' > /tmp/a.$$.r
echo 'install.packages("mgcv", repos="http://cran.rstudio.com/", clean=TRUE, INSTALL_opts=c("--no-docs", "--no-html")) ' >> /tmp/a.$$.r
cat /tmp/a.$$.r | sudo R --vanilla
echo 'options(repos="http://cran.rstudio.com") ' > /tmp/a.$$.r
echo 'install.packages("multcomp", repos="http://cran.rstudio.com/", clean=TRUE, INSTALL_opts=c("--no-docs", "--no-html")) ' >> /tmp/a.$$.r
cat /tmp/a.$$.r | sudo R --vanilla
echo 'options(repos="http://cran.rstudio.com") ' > /tmp/a.$$.r
echo 'install.packages("mvtnorm", repos="http://cran.rstudio.com/", clean=TRUE, INSTALL_opts=c("--no-docs", "--no-html")) ' >> /tmp/a.$$.r
cat /tmp/a.$$.r | sudo R --vanilla
echo 'options(repos="http://cran.rstudio.com") ' > /tmp/a.$$.r
echo 'install.packages("relimp", repos="http://cran.rstudio.com/", clean=TRUE, INSTALL_opts=c("--no-docs", "--no-html")) ' >> /tmp/a.$$.r
cat /tmp/a.$$.r | sudo R --vanilla
echo 'options(repos="http://cran.rstudio.com") ' > /tmp/a.$$.r
echo 'install.packages("rpart", repos="http://cran.rstudio.com/", clean=TRUE, INSTALL_opts=c("--no-docs", "--no-html")) ' >> /tmp/a.$$.r
cat /tmp/a.$$.r | sudo R --vanilla
echo 'options(repos="http://cran.rstudio.com") ' > /tmp/a.$$.r
echo 'install.packages("sandwich", repos="http://cran.rstudio.com/", clean=TRUE, INSTALL_opts=c("--no-docs", "--no-html")) ' >> /tmp/a.$$.r
cat /tmp/a.$$.r | sudo R --vanilla
echo 'options(repos="http://cran.rstudio.com") ' > /tmp/a.$$.r
echo 'install.packages("sm", repos="http://cran.rstudio.com/", clean=TRUE, INSTALL_opts=c("--no-docs", "--no-html")) ' >> /tmp/a.$$.r
cat /tmp/a.$$.r | sudo R --vanilla
echo 'options(repos="http://cran.rstudio.com") ' > /tmp/a.$$.r
echo 'install.packages("spatial", repos="http://cran.rstudio.com/", clean=TRUE, INSTALL_opts=c("--no-docs", "--no-html")) ' >> /tmp/a.$$.r
cat /tmp/a.$$.r | sudo R --vanilla
echo 'options(repos="http://cran.rstudio.com") ' > /tmp/a.$$.r
echo 'install.packages("strucchange", repos="http://cran.rstudio.com/", clean=TRUE, INSTALL_opts=c("--no-docs", "--no-html")) ' >> /tmp/a.$$.r
cat /tmp/a.$$.r | sudo R --vanilla
echo 'options(repos="http://cran.rstudio.com") ' > /tmp/a.$$.r
echo 'install.packages("survival", repos="http://cran.rstudio.com/", clean=TRUE, INSTALL_opts=c("--no-docs", "--no-html")) ' >> /tmp/a.$$.r
cat /tmp/a.$$.r | sudo R --vanilla
# additional
echo 'options(repos="http://cran.rstudio.com") ' > /tmp/a.$$.r
echo 'install.packages("catspec", repos="http://cran.rstudio.com/", clean=TRUE, INSTALL_opts=c("--no-docs", "--no-html")) ' >> /tmp/a.$$.r
cat /tmp/a.$$.r | sudo R --vanilla
echo 'options(repos="http://cran.rstudio.com") ' > /tmp/a.$$.r
echo 'install.packages("cluster", repos="http://cran.rstudio.com/", clean=TRUE, INSTALL_opts=c("--no-docs", "--no-html")) ' >> /tmp/a.$$.r
cat /tmp/a.$$.r | sudo R --vanilla
echo 'options(repos="http://cran.rstudio.com") ' > /tmp/a.$$.r
echo 'install.packages("deldir", repos="http://cran.rstudio.com/", clean=TRUE, INSTALL_opts=c("--no-docs", "--no-html")) ' >> /tmp/a.$$.r
cat /tmp/a.$$.r | sudo R --vanilla
echo 'options(repos="http://cran.rstudio.com") ' > /tmp/a.$$.r
echo 'install.packages("diagram", repos="http://cran.rstudio.com/", clean=TRUE, INSTALL_opts=c("--no-docs", "--no-html")) ' >> /tmp/a.$$.r
cat /tmp/a.$$.r | sudo R --vanilla
echo 'options(repos="http://cran.rstudio.com") ' > /tmp/a.$$.r
echo 'install.packages("fields", repos="http://cran.rstudio.com/", clean=TRUE, INSTALL_opts=c("--no-docs", "--no-html")) ' >> /tmp/a.$$.r
cat /tmp/a.$$.r | sudo R --vanilla
echo 'options(repos="http://cran.rstudio.com") ' > /tmp/a.$$.r
echo 'install.packages("fftw", repos="http://cran.rstudio.com/", clean=TRUE, INSTALL_opts=c("--no-docs", "--no-html")) ' >> /tmp/a.$$.r
cat /tmp/a.$$.r | sudo R --vanilla
echo 'options(repos="http://cran.rstudio.com") ' > /tmp/a.$$.r
echo 'install.packages("gregmisc", repos="http://cran.rstudio.com/", clean=TRUE, INSTALL_opts=c("--no-docs", "--no-html")) ' >> /tmp/a.$$.r
cat /tmp/a.$$.r | sudo R --vanilla
echo 'options(repos="http://cran.rstudio.com") ' > /tmp/a.$$.r
echo 'install.packages("igraph", repos="http://cran.rstudio.com/", clean=TRUE, INSTALL_opts=c("--no-docs", "--no-html")) ' >> /tmp/a.$$.r
cat /tmp/a.$$.r | sudo R --vanilla
echo 'options(repos="http://cran.rstudio.com") ' > /tmp/a.$$.r
echo 'install.packages("nlme", repos="http://cran.rstudio.com/", clean=TRUE, INSTALL_opts=c("--no-docs", "--no-html")) ' >> /tmp/a.$$.r
cat /tmp/a.$$.r | sudo R --vanilla
echo 'options(repos="http://cran.rstudio.com") ' > /tmp/a.$$.r
echo 'install.packages("nnclust", repos="http://cran.rstudio.com/", clean=TRUE, INSTALL_opts=c("--no-docs", "--no-html")) ' >> /tmp/a.$$.r
cat /tmp/a.$$.r | sudo R --vanilla
echo 'options(repos="http://cran.rstudio.com") ' > /tmp/a.$$.r
echo 'install.packages("png", repos="http://cran.rstudio.com/", clean=TRUE, INSTALL_opts=c("--no-docs", "--no-html")) ' >> /tmp/a.$$.r
cat /tmp/a.$$.r | sudo R --vanilla
echo 'options(repos="http://cran.rstudio.com") ' > /tmp/a.$$.r
echo 'install.packages("pixmap", repos="http://cran.rstudio.com/", clean=TRUE, INSTALL_opts=c("--no-docs", "--no-html")) ' >> /tmp/a.$$.r
cat /tmp/a.$$.r | sudo R --vanilla
echo 'options(repos="http://cran.rstudio.com") ' > /tmp/a.$$.r
echo 'install.packages("pvclust", repos="http://cran.rstudio.com/", clean=TRUE, INSTALL_opts=c("--no-docs", "--no-html")) ' >> /tmp/a.$$.r
cat /tmp/a.$$.r | sudo R --vanilla
echo 'options(repos="http://cran.rstudio.com") ' > /tmp/a.$$.r
echo 'install.packages("rgl", repos="http://cran.rstudio.com/", clean=TRUE, INSTALL_opts=c("--no-docs", "--no-html")) ' >> /tmp/a.$$.r
cat /tmp/a.$$.r | sudo R --vanilla
echo 'options(repos="http://cran.rstudio.com") ' > /tmp/a.$$.r
echo 'install.packages("scatterplot3d", repos="http://cran.rstudio.com/", clean=TRUE, INSTALL_opts=c("--no-docs", "--no-html")) ' >> /tmp/a.$$.r
cat /tmp/a.$$.r | sudo R --vanilla
echo 'options(repos="http://cran.rstudio.com") ' > /tmp/a.$$.r
echo 'install.packages("som", repos="http://cran.rstudio.com/", clean=TRUE, INSTALL_opts=c("--no-docs", "--no-html")) ' >> /tmp/a.$$.r
cat /tmp/a.$$.r | sudo R --vanilla
echo 'options(repos="http://cran.rstudio.com") ' > /tmp/a.$$.r
echo 'install.packages("Hmisc", repos="http://cran.rstudio.com/", clean=TRUE, INSTALL_opts=c("--no-docs", "--no-html")) ' >> /tmp/a.$$.r
cat /tmp/a.$$.r | sudo R --vanilla
echo 'options(repos="http://cran.rstudio.com") ' > /tmp/a.$$.r
echo 'install.packages("Rcmdr", repos="http://cran.rstudio.com/", clean=TRUE, INSTALL_opts=c("--no-docs", "--no-html")) ' >> /tmp/a.$$.r
cat /tmp/a.$$.r | sudo R --vanilla
echo 'options(repos="http://cran.rstudio.com") ' > /tmp/a.$$.r
echo 'install.packages("RcmdrPlugin.KMggplot2", repos="http://cran.rstudio.com/", clean=TRUE, INSTALL_opts=c("--no-docs", "--no-html")) ' >> /tmp/a.$$.r
cat /tmp/a.$$.r | sudo R --vanilla
echo 'options(repos="http://cran.rstudio.com") ' > /tmp/a.$$.r
echo 'install.packages("RSQLite", repos="http://cran.rstudio.com/", clean=TRUE, INSTALL_opts=c("--no-docs", "--no-html")) ' >> /tmp/a.$$.r
cat /tmp/a.$$.r | sudo R --vanilla
echo 'options(repos="http://cran.rstudio.com") ' > /tmp/a.$$.r
echo 'install.packages("CCA", repos="http://cran.rstudio.com/", clean=TRUE, INSTALL_opts=c("--no-docs", "--no-html")) ' >> /tmp/a.$$.r
cat /tmp/a.$$.r | sudo R --vanilla
echo 'options(repos="http://cran.rstudio.com") ' > /tmp/a.$$.r
echo 'install.packages("KernSmooth", repos="http://cran.rstudio.com/", clean=TRUE, INSTALL_opts=c("--no-docs", "--no-html")) ' >> /tmp/a.$$.r
cat /tmp/a.$$.r | sudo R --vanilla
echo 'options(repos="http://cran.rstudio.com") ' > /tmp/a.$$.r
echo 'install.packages("MASS", repos="http://cran.rstudio.com/", clean=TRUE, INSTALL_opts=c("--no-docs", "--no-html")) ' >> /tmp/a.$$.r
cat /tmp/a.$$.r | sudo R --vanilla
echo 'options(repos="http://cran.rstudio.com") ' > /tmp/a.$$.r
echo 'install.packages("Matrix", repos="http://cran.rstudio.com/", clean=TRUE, INSTALL_opts=c("--no-docs", "--no-html")) ' >> /tmp/a.$$.r
cat /tmp/a.$$.r | sudo R --vanilla
echo 'options(repos="http://cran.rstudio.com") ' > /tmp/a.$$.r
echo 'install.packages("Rcmdr", repos="http://cran.rstudio.com/", clean=TRUE, INSTALL_opts=c("--no-docs", "--no-html")) ' >> /tmp/a.$$.r
cat /tmp/a.$$.r | sudo R --vanilla
# more
echo 'options(repos="http://cran.rstudio.com") ' > /tmp/a.$$.r
echo 'install.packages("ggplot2", repos="http://cran.rstudio.com/", clean=TRUE, INSTALL_opts=c("--no-docs", "--no-html")) ' >> /tmp/a.$$.r
cat /tmp/a.$$.r | sudo R --vanilla
echo 'options(repos="http://cran.rstudio.com") ' > /tmp/a.$$.r
echo 'install.packages("xlsxjars", repos="http://cran.rstudio.com/", clean=TRUE, INSTALL_opts=c("--no-docs", "--no-html")) ' >> /tmp/a.$$.r
cat /tmp/a.$$.r | sudo R --vanilla
echo 'options(repos="http://cran.rstudio.com") ' > /tmp/a.$$.r
echo 'install.packages("xlsx", repos="http://cran.rstudio.com/", clean=TRUE, INSTALL_opts=c("--no-docs", "--no-html")) ' >> /tmp/a.$$.r
cat /tmp/a.$$.r | sudo R --vanilla
echo 'options(repos="http://cran.rstudio.com") ' > /tmp/a.$$.r
echo 'install.packages("shiny", repos="http://cran.rstudio.com/", clean=TRUE, INSTALL_opts=c("--no-docs", "--no-html")) ' >> /tmp/a.$$.r
cat /tmp/a.$$.r | sudo R --vanilla
echo 'options(repos="http://cran.rstudio.com") ' > /tmp/a.$$.r
echo 'install.packages("chron", repos="http://cran.rstudio.com/", clean=TRUE, INSTALL_opts=c("--no-docs", "--no-html")) ' >> /tmp/a.$$.r
cat /tmp/a.$$.r | sudo R --vanilla
echo 'options(repos="http://cran.rstudio.com") ' > /tmp/a.$$.r
echo 'install.packages("sqldf", repos="http://cran.rstudio.com/", clean=TRUE, INSTALL_opts=c("--no-docs", "--no-html")) ' >> /tmp/a.$$.r
cat /tmp/a.$$.r | sudo R --vanilla
echo 'options(repos="http://cran.rstudio.com") ' > /tmp/a.$$.r
echo 'install.packages("plyr", repos="http://cran.rstudio.com/", clean=TRUE, INSTALL_opts=c("--no-docs", "--no-html")) ' >> /tmp/a.$$.r
cat /tmp/a.$$.r | sudo R --vanilla
echo 'options(repos="http://cran.rstudio.com") ' > /tmp/a.$$.r
echo 'install.packages("entropy", repos="http://cran.rstudio.com/", clean=TRUE, INSTALL_opts=c("--no-docs", "--no-html")) ' >> /tmp/a.$$.r
cat /tmp/a.$$.r | sudo R --vanilla
echo 'options(repos="http://cran.rstudio.com") ' > /tmp/a.$$.r
echo 'install.packages("moments", repos="http://cran.rstudio.com/", clean=TRUE, INSTALL_opts=c("--no-docs", "--no-html")) ' >> /tmp/a.$$.r
cat /tmp/a.$$.r | sudo R --vanilla
echo 'options(repos="http://cran.rstudio.com") ' > /tmp/a.$$.r
echo 'install.packages("spatstat", repos="http://cran.rstudio.com/", clean=TRUE, INSTALL_opts=c("--no-docs", "--no-html")) ' >> /tmp/a.$$.r
cat /tmp/a.$$.r | sudo R --vanilla
echo 'options(repos="http://cran.rstudio.com") ' > /tmp/a.$$.r
echo 'install.packages("png", repos="http://cran.rstudio.com/", clean=TRUE, INSTALL_opts=c("--no-docs", "--no-html")) ' >> /tmp/a.$$.r
cat /tmp/a.$$.r | sudo R --vanilla
echo 'options(repos="http://cran.rstudio.com") ' > /tmp/a.$$.r
echo 'install.packages("biOps", repos="http://cran.rstudio.com/", clean=TRUE, INSTALL_opts=c("--no-docs", "--no-html")) ' >> /tmp/a.$$.r
cat /tmp/a.$$.r | sudo R --vanilla
echo 'options(repos="http://cran.rstudio.com") ' > /tmp/a.$$.r
echo 'install.packages("biOpsGUI", repos="http://cran.rstudio.com/", clean=TRUE, INSTALL_opts=c("--no-docs", "--no-html")) ' >> /tmp/a.$$.r
cat /tmp/a.$$.r | sudo R --vanilla
echo 'options(repos="http://cran.rstudio.com") ' > /tmp/a.$$.r
echo 'install.packages("maptools", repos="http://cran.rstudio.com/", clean=TRUE, INSTALL_opts=c("--no-docs", "--no-html")) ' >> /tmp/a.$$.r
cat /tmp/a.$$.r | sudo R --vanilla
echo 'options(repos="http://cran.rstudio.com") ' > /tmp/a.$$.r
echo 'install.packages("caTools", repos="http://cran.rstudio.com/", clean=TRUE, INSTALL_opts=c("--no-docs", "--no-html")) ' >> /tmp/a.$$.r
cat /tmp/a.$$.r | sudo R --vanilla
# echo 'options(repos="http://cran.rstudio.com") ' > /tmp/a.$$.r
# echo 'install.packages("class", repos="http://cran.rstudio.com/", clean=TRUE, INSTALL_opts=c("--no-docs", "--no-html")) ' >> /tmp/a.$$.r
# cat /tmp/a.$$.r | sudo R --vanilla
echo 'options(repos="http://cran.rstudio.com") ' > /tmp/a.$$.r
echo 'install.packages("evd", repos="http://cran.rstudio.com/", clean=TRUE, INSTALL_opts=c("--no-docs", "--no-html")) ' >> /tmp/a.$$.r
cat /tmp/a.$$.r | sudo R --vanilla
echo 'options(repos="http://cran.rstudio.com") ' > /tmp/a.$$.r
echo 'install.packages("its", repos="http://cran.rstudio.com/", clean=TRUE, INSTALL_opts=c("--no-docs", "--no-html")) ' >> /tmp/a.$$.r
cat /tmp/a.$$.r | sudo R --vanilla
echo 'options(repos="http://cran.rstudio.com") ' > /tmp/a.$$.r
echo 'install.packages("mapproj", repos="http://cran.rstudio.com/", clean=TRUE, INSTALL_opts=c("--no-docs", "--no-html")) ' >> /tmp/a.$$.r
cat /tmp/a.$$.r | sudo R --vanilla
echo 'options(repos="http://cran.rstudio.com") ' > /tmp/a.$$.r
echo 'install.packages("mnormt", repos="http://cran.rstudio.com/", clean=TRUE, INSTALL_opts=c("--no-docs", "--no-html")) ' >> /tmp/a.$$.r
cat /tmp/a.$$.r | sudo R --vanilla
echo 'options(repos="http://cran.rstudio.com") ' > /tmp/a.$$.r
echo 'install.packages("sm", repos="http://cran.rstudio.com/", clean=TRUE, INSTALL_opts=c("--no-docs", "--no-html")) ' >> /tmp/a.$$.r
cat /tmp/a.$$.r | sudo R --vanilla
echo 'options(repos="http://cran.rstudio.com") ' > /tmp/a.$$.r
echo 'install.packages("sp", repos="http://cran.rstudio.com/", clean=TRUE, INSTALL_opts=c("--no-docs", "--no-html")) ' >> /tmp/a.$$.r
cat /tmp/a.$$.r | sudo R --vanilla
echo 'options(repos="http://cran.rstudio.com") ' > /tmp/a.$$.r
echo 'install.packages("stabledist", repos="http://cran.rstudio.com/", clean=TRUE, INSTALL_opts=c("--no-docs", "--no-html")) ' >> /tmp/a.$$.r
cat /tmp/a.$$.r | sudo R --vanilla
echo 'options(repos="http://cran.rstudio.com") ' > /tmp/a.$$.r
echo 'install.packages("timeSeries", repos="http://cran.rstudio.com/", clean=TRUE, INSTALL_opts=c("--no-docs", "--no-html")) ' >> /tmp/a.$$.r
cat /tmp/a.$$.r | sudo R --vanilla
echo 'options(repos="http://cran.rstudio.com") ' > /tmp/a.$$.r
echo 'install.packages("tseries", repos="http://cran.rstudio.com/", clean=TRUE, INSTALL_opts=c("--no-docs", "--no-html")) ' >> /tmp/a.$$.r
cat /tmp/a.$$.r | sudo R --vanilla
echo 'options(repos="http://cran.rstudio.com") ' > /tmp/a.$$.r
echo 'install.packages("bayesm", repos="http://cran.rstudio.com/", clean=TRUE, INSTALL_opts=c("--no-docs", "--no-html")) ' >> /tmp/a.$$.r
cat /tmp/a.$$.r | sudo R --vanilla
echo 'options(repos="http://cran.rstudio.com") ' > /tmp/a.$$.r
echo 'install.packages("gdata", repos="http://cran.rstudio.com/", clean=TRUE, INSTALL_opts=c("--no-docs", "--no-html")) ' >> /tmp/a.$$.r
cat /tmp/a.$$.r | sudo R --vanilla
echo 'options(repos="http://cran.rstudio.com") ' > /tmp/a.$$.r
echo 'install.packages("gmodels", repos="http://cran.rstudio.com/", clean=TRUE, INSTALL_opts=c("--no-docs", "--no-html")) ' >> /tmp/a.$$.r
cat /tmp/a.$$.r | sudo R --vanilla
echo 'options(repos="http://cran.rstudio.com") ' > /tmp/a.$$.r
echo 'install.packages("rpart", repos="http://cran.rstudio.com/", clean=TRUE, INSTALL_opts=c("--no-docs", "--no-html")) ' >> /tmp/a.$$.r
cat /tmp/a.$$.r | sudo R --vanilla
echo 'options(repos="http://cran.rstudio.com") ' > /tmp/a.$$.r
echo 'install.packages("Zelig", repos="http://cran.rstudio.com/", clean=TRUE, INSTALL_opts=c("--no-docs", "--no-html")) ' >> /tmp/a.$$.r
cat /tmp/a.$$.r | sudo R --vanilla
echo 'options(repos="http://cran.rstudio.com") ' > /tmp/a.$$.r
echo 'install.packages("forecast", repos="http://cran.rstudio.com/", clean=TRUE, INSTALL_opts=c("--no-docs", "--no-html")) ' >> /tmp/a.$$.r
cat /tmp/a.$$.r | sudo R --vanilla
# again
echo 'options(repos="http://cran.rstudio.com")' > /tmp/a.$$.r
echo 'update.packages(checkBuilt=TRUE, ask=FALSE, repos="http://cran.rstudio.com/", clean=TRUE, INSTALL_opts=c("--no-docs", "--no-html")) ' >> /tmp/a.$$.r
cat /tmp/a.$$.r | sudo R --vanilla
#
sudo rm /tmp/a.$$.r
echo 'source("http://bioconductor.org/biocLite.R")' > /tmp/a.$$.r
echo 'biocLite("osmar") ' >> /tmp/a.$$.r
cat /tmp/a.$$.r | sudo R --vanilla
#
sudo rm /tmp/a.$$.r
echo 'source("http://bioconductor.org/biocLite.R")' > /tmp/a.$$.r
echo 'biocLite("Rgraphviz") ' >> /tmp/a.$$.r
cat /tmp/a.$$.r | sudo R --vanilla
#
sudo rm /tmp/a.$$.r
echo 'source("http://bioconductor.org/biocLite.R")' > /tmp/a.$$.r
echo 'biocLite("hypergraph") ' >> /tmp/a.$$.r
cat /tmp/a.$$.r | sudo R --vanilla
#
sudo rm /tmp/a.$$.r
echo 'source("http://bioconductor.org/biocLite.R")' > /tmp/a.$$.r
echo 'biocLite("RBGL") ' >> /tmp/a.$$.r
cat /tmp/a.$$.r | sudo R --vanilla
#
sudo rm /tmp/a.$$.r
echo 'source("http://bioconductor.org/biocLite.R")' > /tmp/a.$$.r
echo 'biocLite("GraphPart") ' >> /tmp/a.$$.r
cat /tmp/a.$$.r | sudo R --vanilla
#
sudo rm /tmp/a.$$.r
echo 'options(repos="http://cran.rstudio.com") ' > /tmp/a.$$.r
echo 'install.packages("XML", repos="http://cran.rstudio.com/", clean=TRUE, INSTALL_opts=c("--no-docs", "--no-html")) ' >> /tmp/a.$$.r
cat /tmp/a.$$.r | sudo R --vanilla
#
sudo rm /tmp/a.$$.r
echo 'options(repos="http://cran.rstudio.com") ' > /tmp/a.$$.r
echo 'install.packages("gridExtra", repos="http://cran.rstudio.com/", clean=TRUE, INSTALL_opts=c("--no-docs", "--no-html")) ' >> /tmp/a.$$.r
cat /tmp/a.$$.r | sudo R --vanilla
#
sudo rm /tmp/a.$$.r
echo 'options(repos="http://cran.rstudio.com") ' > /tmp/a.$$.r
echo 'install.packages("gridSVG", repos="http://cran.rstudio.com/", clean=TRUE, INSTALL_opts=c("--no-docs", "--no-html")) ' >> /tmp/a.$$.r
cat /tmp/a.$$.r | sudo R --vanilla
#
sudo rm /tmp/a.$$.r
echo 'options(repos="http://cran.rstudio.com") ' > /tmp/a.$$.r
echo 'install.packages("png", repos="http://cran.rstudio.com/", clean=TRUE, INSTALL_opts=c("--no-docs", "--no-html")) ' >> /tmp/a.$$.r
cat /tmp/a.$$.r | sudo R --vanilla
#
sudo rm /tmp/a.$$.r
echo 'options(repos="http://cran.rstudio.com") ' > /tmp/a.$$.r
echo 'install.packages("jpeg", repos="http://cran.rstudio.com/", clean=TRUE, INSTALL_opts=c("--no-docs", "--no-html")) ' >> /tmp/a.$$.r
cat /tmp/a.$$.r | sudo R --vanilla
#
sudo rm /tmp/a.$$.r
echo 'options(repos="http://cran.rstudio.com") ' > /tmp/a.$$.r
echo 'install.packages("igraph", repos="http://cran.rstudio.com/", clean=TRUE, INSTALL_opts=c("--no-docs", "--no-html")) ' >> /tmp/a.$$.r
cat /tmp/a.$$.r | sudo R --vanilla
#
sudo rm /tmp/a.$$.r
echo 'options(repos="http://cran.rstudio.com") ' > /tmp/a.$$.r
echo 'install.packages("Rcpp", repos="http://cran.rstudio.com/", clean=TRUE, INSTALL_opts=c("--no-docs", "--no-html")) ' >> /tmp/a.$$.r
cat /tmp/a.$$.r | sudo R --vanilla
#
sudo rm /tmp/a.$$.r
echo 'options(repos="http://cran.rstudio.com") ' > /tmp/a.$$.r
echo 'install.packages("RcppExamples", repos="http://cran.rstudio.com/", clean=TRUE, INSTALL_opts=c("--no-docs", "--no-html")) ' >> /tmp/a.$$.r
cat /tmp/a.$$.r | sudo R --vanilla
#
sudo rm /tmp/a.$$.r
echo 'options(repos="http://cran.rstudio.com") ' > /tmp/a.$$.r
echo 'install.packages("mvoutlier", repos="http://cran.rstudio.com/", clean=TRUE, INSTALL_opts=c("--no-docs", "--no-html")) ' >> /tmp/a.$$.r
cat /tmp/a.$$.r | sudo R --vanilla
#
sudo rm /tmp/a.$$.r
echo 'options(repos="http://cran.rstudio.com") ' > /tmp/a.$$.r
echo 'install.packages("randomForest", repos="http://cran.rstudio.com/", clean=TRUE, INSTALL_opts=c("--no-docs", "--no-html")) ' >> /tmp/a.$$.r
cat /tmp/a.$$.r | sudo R --vanilla
#
sudo rm /tmp/a.$$.r
echo 'options(repos="http://cran.rstudio.com") ' > /tmp/a.$$.r
echo 'install.packages("plyr", repos="http://cran.rstudio.com/", clean=TRUE, INSTALL_opts=c("--no-docs", "--no-html")) ' >> /tmp/a.$$.r
cat /tmp/a.$$.r | sudo R --vanilla
#
sudo rm /tmp/a.$$.r
echo 'options(repos="http://cran.rstudio.com") ' > /tmp/a.$$.r
echo 'install.packages("reshape2", repos="http://cran.rstudio.com/", clean=TRUE, INSTALL_opts=c("--no-docs", "--no-html")) ' >> /tmp/a.$$.r
cat /tmp/a.$$.r | sudo R --vanilla
#
sudo rm /tmp/a.$$.r
echo 'options(repos="http://cran.rstudio.com") ' > /tmp/a.$$.r
echo 'install.packages("forecast", repos="http://cran.rstudio.com/", clean=TRUE, INSTALL_opts=c("--no-docs", "--no-html")) ' >> /tmp/a.$$.r
cat /tmp/a.$$.r | sudo R --vanilla
#
sudo rm /tmp/a.$$.r
echo 'options(repos="http://cran.rstudio.com") ' > /tmp/a.$$.r
echo 'install.packages("stringr", repos="http://cran.rstudio.com/", clean=TRUE, INSTALL_opts=c("--no-docs", "--no-html")) ' >> /tmp/a.$$.r
cat /tmp/a.$$.r | sudo R --vanilla
#
sudo rm /tmp/a.$$.r
echo 'options(repos="http://cran.rstudio.com") ' > /tmp/a.$$.r
echo 'install.packages("lubridate", repos="http://cran.rstudio.com/", clean=TRUE, INSTALL_opts=c("--no-docs", "--no-html")) ' >> /tmp/a.$$.r
cat /tmp/a.$$.r | sudo R --vanilla
#
sudo rm /tmp/a.$$.r
echo 'options(repos="http://cran.rstudio.com") ' > /tmp/a.$$.r
echo 'install.packages("sqldf", repos="http://cran.rstudio.com/", clean=TRUE, INSTALL_opts=c("--no-docs", "--no-html")) ' >> /tmp/a.$$.r
cat /tmp/a.$$.r | sudo R --vanilla
#
sudo rm /tmp/a.$$.r
echo 'options(repos="http://cran.rstudio.com") ' > /tmp/a.$$.r
echo 'install.packages("ggplot2", repos="http://cran.rstudio.com/", clean=TRUE, INSTALL_opts=c("--no-docs", "--no-html")) ' >> /tmp/a.$$.r
cat /tmp/a.$$.r | sudo R --vanilla
#
sudo rm /tmp/a.$$.r
echo 'options(repos="http://cran.rstudio.com") ' > /tmp/a.$$.r
echo 'install.packages("party", repos="http://cran.rstudio.com/", clean=TRUE, INSTALL_opts=c("--no-docs", "--no-html")) ' >> /tmp/a.$$.r
cat /tmp/a.$$.r | sudo R --vanilla
#
sudo rm /tmp/a.$$.r
echo 'options(repos="http://cran.rstudio.com") ' > /tmp/a.$$.r
echo 'install.packages("gdm", repos="http://cran.rstudio.com/", clean=TRUE, INSTALL_opts=c("--no-docs", "--no-html")) ' >> /tmp/a.$$.r
cat /tmp/a.$$.r | sudo R --vanilla
#
sudo rm /tmp/a.$$.r
echo 'options(repos="http://cran.rstudio.com") ' > /tmp/a.$$.r
echo 'install.packages("survival", repos="http://cran.rstudio.com/", clean=TRUE, INSTALL_opts=c("--no-docs", "--no-html")) ' >> /tmp/a.$$.r
cat /tmp/a.$$.r | sudo R --vanilla
#
sudo rm /tmp/a.$$.r
echo 'options(repos="http://cran.rstudio.com") ' > /tmp/a.$$.r
echo 'install.packages("caTools", repos="http://cran.rstudio.com/", clean=TRUE, INSTALL_opts=c("--no-docs", "--no-html")) ' >> /tmp/a.$$.r
cat /tmp/a.$$.r | sudo R --vanilla
#
sudo rm /tmp/a.$$.r
echo 'options(repos="http://cran.rstudio.com") ' > /tmp/a.$$.r
echo 'install.packages("Epi", repos="http://cran.rstudio.com/", clean=TRUE, INSTALL_opts=c("--no-docs", "--no-html")) ' >> /tmp/a.$$.r
cat /tmp/a.$$.r | sudo R --vanilla
#
sudo rm /tmp/a.$$.r
echo 'options(repos="http://cran.rstudio.com") ' > /tmp/a.$$.r
echo 'install.packages("vcd", repos="http://cran.rstudio.com/", clean=TRUE, INSTALL_opts=c("--no-docs", "--no-html")) ' >> /tmp/a.$$.r
cat /tmp/a.$$.r | sudo R --vanilla
#
sudo rm /tmp/a.$$.r
echo 'options(repos="http://cran.rstudio.com") ' > /tmp/a.$$.r
echo 'install.packages("Rz", repos="http://cran.rstudio.com/", clean=TRUE, INSTALL_opts=c("--no-docs", "--no-html")) ' >> /tmp/a.$$.r
cat /tmp/a.$$.r | sudo R --vanilla
#
sudo rm /tmp/a.$$.r
echo 'options(repos="http://cran.rstudio.com") ' > /tmp/a.$$.r
echo 'install.packages("parallel", repos="http://cran.rstudio.com/", clean=TRUE, INSTALL_opts=c("--no-docs", "--no-html")) ' >> /tmp/a.$$.r
cat /tmp/a.$$.r | sudo R --vanilla
#
sudo rm /tmp/a.$$.r
echo 'options(repos="http://cran.rstudio.com") ' > /tmp/a.$$.r
echo 'install.packages("compiler", repos="http://cran.rstudio.com/", clean=TRUE, INSTALL_opts=c("--no-docs", "--no-html")) ' >> /tmp/a.$$.r
cat /tmp/a.$$.r | sudo R --vanilla
#
sudo rm /tmp/a.$$.r
echo 'options(repos="http://cran.rstudio.com") ' > /tmp/a.$$.r
echo 'install.packages("Imap", repos="http://cran.rstudio.com/", clean=TRUE, INSTALL_opts=c("--no-docs", "--no-html")) ' >> /tmp/a.$$.r
cat /tmp/a.$$.r | sudo R --vanilla
#
sudo rm /tmp/a.$$.r
echo 'options(repos="http://cran.rstudio.com") ' > /tmp/a.$$.r
echo 'install.packages("changepoint", repos="http://cran.rstudio.com/", clean=TRUE, INSTALL_opts=c("--no-docs", "--no-html")) ' >> /tmp/a.$$.r
cat /tmp/a.$$.r | sudo R --vanilla
#
sudo rm /tmp/a.$$.r
echo 'options(repos="http://cran.rstudio.com") ' > /tmp/a.$$.r
echo 'install.packages("gstat", repos="http://cran.rstudio.com/", clean=TRUE, INSTALL_opts=c("--no-docs", "--no-html")) ' >> /tmp/a.$$.r
cat /tmp/a.$$.r | sudo R --vanilla
#
sudo rm /tmp/a.$$.r
echo 'options(repos="http://cran.rstudio.com") ' > /tmp/a.$$.r
echo 'install.packages("sp", repos="http://cran.rstudio.com/", clean=TRUE, INSTALL_opts=c("--no-docs", "--no-html")) ' >> /tmp/a.$$.r
cat /tmp/a.$$.r | sudo R --vanilla
#
sudo rm /tmp/a.$$.r
echo 'options(repos="http://cran.rstudio.com") ' > /tmp/a.$$.r
echo 'install.packages("rgeos", repos="http://cran.rstudio.com/", clean=TRUE, INSTALL_opts=c("--no-docs", "--no-html")) ' >> /tmp/a.$$.r
cat /tmp/a.$$.r | sudo R --vanilla
#
sudo rm /tmp/a.$$.r
echo 'options(repos="http://cran.rstudio.com") ' > /tmp/a.$$.r
echo 'install.packages("maptools", repos="http://cran.rstudio.com/", clean=TRUE, INSTALL_opts=c("--no-docs", "--no-html")) ' >> /tmp/a.$$.r
cat /tmp/a.$$.r | sudo R --vanilla
#
sudo rm /tmp/a.$$.r
echo 'options(repos="http://cran.rstudio.com") ' > /tmp/a.$$.r
echo 'install.packages("shapefiles", repos="http://cran.rstudio.com/", clean=TRUE, INSTALL_opts=c("--no-docs", "--no-html")) ' >> /tmp/a.$$.r
cat /tmp/a.$$.r | sudo R --vanilla
#
sudo rm /tmp/a.$$.r
echo 'options(repos="http://cran.rstudio.com") ' > /tmp/a.$$.r
echo 'install.packages("spsurvey", repos="http://cran.rstudio.com/", clean=TRUE, INSTALL_opts=c("--no-docs", "--no-html")) ' >> /tmp/a.$$.r
cat /tmp/a.$$.r | sudo R --vanilla
#
sudo rm /tmp/a.$$.r
echo 'options(repos="http://cran.rstudio.com") ' > /tmp/a.$$.r
echo 'install.packages("sp", repos="http://cran.rstudio.com/", clean=TRUE, INSTALL_opts=c("--no-docs", "--no-html")) ' >> /tmp/a.$$.r
cat /tmp/a.$$.r | sudo R --vanilla
#
sudo rm /tmp/a.$$.r
echo 'options(repos="http://cran.rstudio.com") ' > /tmp/a.$$.r
echo 'install.packages("RColorBrewer", repos="http://cran.rstudio.com/", clean=TRUE, INSTALL_opts=c("--no-docs", "--no-html")) ' >> /tmp/a.$$.r
cat /tmp/a.$$.r | sudo R --vanilla
#
sudo rm /tmp/a.$$.r
echo 'options(repos="http://cran.rstudio.com") ' > /tmp/a.$$.r
echo 'install.packages("forecast", repos="http://cran.rstudio.com/", clean=TRUE, INSTALL_opts=c("--no-docs", "--no-html")) ' >> /tmp/a.$$.r
cat /tmp/a.$$.r | sudo R --vanilla
#
sudo rm /tmp/a.$$.r
echo 'options(repos="http://cran.rstudio.com") ' > /tmp/a.$$.r
echo 'install.packages("psych", repos="http://cran.rstudio.com/", clean=TRUE, INSTALL_opts=c("--no-docs", "--no-html")) ' >> /tmp/a.$$.r
cat /tmp/a.$$.r | sudo R --vanilla
#
sudo rm /tmp/a.$$.r
echo 'options(repos="http://cran.rstudio.com") ' > /tmp/a.$$.r
echo 'install.packages("xts", repos="http://cran.rstudio.com/", clean=TRUE, INSTALL_opts=c("--no-docs", "--no-html")) ' >> /tmp/a.$$.r
cat /tmp/a.$$.r | sudo R --vanilla
#
sudo rm /tmp/a.$$.r
echo 'options(repos="http://cran.rstudio.com") ' > /tmp/a.$$.r
echo 'install.packages("timeSeries", repos="http://cran.rstudio.com/", clean=TRUE, INSTALL_opts=c("--no-docs", "--no-html")) ' >> /tmp/a.$$.r
cat /tmp/a.$$.r | sudo R --vanilla
#
sudo rm /tmp/a.$$.r
echo 'options(repos="http://cran.rstudio.com") ' > /tmp/a.$$.r
echo 'install.packages("gregmisc", repos="http://cran.rstudio.com/", clean=TRUE, INSTALL_opts=c("--no-docs", "--no-html")) ' >> /tmp/a.$$.r
cat /tmp/a.$$.r | sudo R --vanilla
#
sudo rm /tmp/a.$$.r
echo 'options(repos="http://cran.rstudio.com") ' > /tmp/a.$$.r
echo 'install.packages("mclust", repos="http://cran.rstudio.com/", clean=TRUE, INSTALL_opts=c("--no-docs", "--no-html")) ' >> /tmp/a.$$.r
cat /tmp/a.$$.r | sudo R --vanilla
#
sudo rm /tmp/a.$$.r
echo 'options(repos="http://cran.rstudio.com") ' > /tmp/a.$$.r
echo 'install.packages("topmodel", repos="http://cran.rstudio.com/", clean=TRUE, INSTALL_opts=c("--no-docs", "--no-html")) ' >> /tmp/a.$$.r
cat /tmp/a.$$.r | sudo R --vanilla
#
sudo rm /tmp/a.$$.r
echo 'options(repos="http://cran.rstudio.com") ' > /tmp/a.$$.r
echo 'install.packages("insol", repos="http://cran.rstudio.com/", clean=TRUE, INSTALL_opts=c("--no-docs", "--no-html")) ' >> /tmp/a.$$.r
cat /tmp/a.$$.r | sudo R --vanilla
#
sudo rm /tmp/a.$$.r
echo 'options(repos="http://cran.rstudio.com") ' > /tmp/a.$$.r
echo 'install.packages("rJava", repos="http://cran.rstudio.com/", clean=TRUE, INSTALL_opts=c("--no-docs", "--no-html")) ' >> /tmp/a.$$.r
cat /tmp/a.$$.r | sudo R --vanilla
#
sudo rm /tmp/a.$$.r
echo 'options(repos="http://cran.rstudio.com") ' > /tmp/a.$$.r
echo 'install.packages("RWekajars", repos="http://cran.rstudio.com/", clean=TRUE, INSTALL_opts=c("--no-docs", "--no-html")) ' >> /tmp/a.$$.r
cat /tmp/a.$$.r | sudo R --vanilla
#
sudo rm /tmp/a.$$.r
echo 'options(repos="http://cran.rstudio.com") ' > /tmp/a.$$.r
echo 'install.packages("RWeka", repos="http://cran.rstudio.com/", clean=TRUE, INSTALL_opts=c("--no-docs", "--no-html")) ' >> /tmp/a.$$.r
cat /tmp/a.$$.r | sudo R --vanilla
#
sudo rm /tmp/a.$$.r
echo 'options(repos="http://cran.rstudio.com") ' > /tmp/a.$$.r
echo 'install.packages("Snowball", repos="http://cran.rstudio.com/", clean=TRUE, INSTALL_opts=c("--no-docs", "--no-html")) ' >> /tmp/a.$$.r
cat /tmp/a.$$.r | sudo R --vanilla
#
sudo rm /tmp/a.$$.r
echo 'options(repos="http://cran.rstudio.com") ' > /tmp/a.$$.r
echo 'install.packages("lsa", repos="http://cran.rstudio.com/", clean=TRUE, INSTALL_opts=c("--no-docs", "--no-html")) ' >> /tmp/a.$$.r
cat /tmp/a.$$.r | sudo R --vanilla
#
sudo rm /tmp/a.$$.r
echo 'options(repos="http://cran.rstudio.com") ' > /tmp/a.$$.r
echo 'install.packages("stringdist", repos="http://cran.rstudio.com/", clean=TRUE, INSTALL_opts=c("--no-docs", "--no-html")) ' >> /tmp/a.$$.r
cat /tmp/a.$$.r | sudo R --vanilla
# again
echo 'options(repos="http://cran.rstudio.com")' > /tmp/a.$$.r
echo 'update.packages(checkBuilt=TRUE, ask=FALSE, repos="http://cran.rstudio.com/", clean=TRUE, INSTALL_opts=c("--no-docs", "--no-html")) ' >> /tmp/a.$$.r
cat /tmp/a.$$.r | sudo R --vanilla
# again and again
echo 'options(repos="http://cran.rstudio.com")' > /tmp/a.$$.r
echo 'update.packages(checkBuilt=TRUE, ask=FALSE, repos="http://cran.rstudio.com/") ' >> /tmp/a.$$.r
cat /tmp/a.$$.r | sudo R --vanilla
curl -fsS https://dlang.org/install.sh | bash -s dmdOne Drive クライアント(書きかけ)
https://github.com/skilion/onedrive
sudo apt -yV install libcurl4-openssl-dev sudo apt -yV install libsqlite3-dev sudo wget http://master.dl.sourceforge.net/project/d-apt/files/d-apt.list -O /etc/apt/sources.list.d/d-apt.list sudo apt-get update && sudo apt-get -y --allow-unauthenticated install --reinstall d-apt-keyring sudo apt-get update && sudo apt-get install dmd-compiler dub git clone https://github.com/skilion/onedrive.git cd onedrive make sudo make install